桃类胡萝卜素合成关键基因PpCCD4的表达与启动子活性分析Expression and promoter activity analysis of PpCCD4 closely related to carotenoid synthesis in peach
范家琪;吴金龙;李勇;别航灵;王蛟;郭健;曹珂;王力荣;
摘要(Abstract):
【目的】分析桃果实成熟过程中类胡萝卜素总量与关键基因PpCCD4表达的相关性,探究不同品种PpCCD4启动子的活性差异,进而解释PpCCD4在黄白肉果实中的表达差异。【方法】测定果实发育时期类胡萝卜素总含量,并与该时期PpCCD4的表达进行相关性分析,分别检测果实PpCCD4转录本差异,进行基因全长与启动子序列分析。构建PpCCD4启动子驱动GUS表达载体并转化农杆菌侵染桃果肉,根据果肉GUS染色分析2种启动子活性的差异,以期解释PpCCD4在果实发育时期表达量的差异。【结果】‘燕红’成熟过程中果实类胡萝卜素总含量降低,其PpCCD4在发育过程中的表达显著上调‘;金童6号’果实类胡萝卜素总含量升高,其PpCCD4的表达始终处于较低水平‘。金童6号’中PpCCD4相较‘燕红’在CDS区发生了2个碱基的插入,且两PpCCD4转录本不同,启动子克隆发现‘燕红’对应的启动子有较多的转录增强和启动元件,而黄肉品种则具有更多的抗逆应答元件;同时GUS染色结果表示,桃果肉中2种启动子驱动的GUS染色有明显的显色差异,启动子活性差异显著。【结论】黄肉品种中移码突变的产生造成了PpCCD4的功能丧失;2个品种果肉PpCCD4转录模式不同,其启动子活性的差异是造成PpCCD4在黄肉和白肉果实中表达差异显著的主要原因。
关键词(KeyWords): 桃;类胡萝卜素;PpCCD4;启动子活性
基金项目(Foundation): 国家桃产业技术体系(CARS-30-1-04);; 中国农业科学院科技创新工程(CAAS-ASTIP-ZZFR-01)
作者(Author): 范家琪;吴金龙;李勇;别航灵;王蛟;郭健;曹珂;王力荣;
Email:
DOI: 10.13925/j.cnki.gsxb.20200097
参考文献(References):
- [1]MIKI W.Biological functions and activities of animal carotenoids[J].Pure&Applied Chemistry,1991,63(1):141-146.
- [2]LICHTENTHALER H K,ROHMER M,SCHWENDER J.Two independent biochemical pathways for isopentenyl diphosphate and isoprenoid biosynthesis in higher plants[J].Physiologia Plantarum,1997,101(3):643-652.
- [3]徐昌杰,张上隆.植物类胡萝卜素的生物合成及其调控[J].植物生理学通讯,2000,36(1):64-70.XU Changjie,ZHANG Shanglong.Caroyenoid biosynthesis and its regulation in plants[J].Plant Physiology Communications,2000,36(1):64-70.
- [4]曹洪波.转基因调控柑橘类胡萝卜素积累的细胞学和代谢研究[D].武汉:华中农业大学,2012.CAO Hongbo.Cytologic and metabolic studies of engineered carotenoid accumulation in citrus[D].Wuhan:Huazhong Agricultural University,2012.
- [5]BARTLEY G E,VIITANEN P V,PECKER I,CHAMOVITZ D,HIRSCHBERG J,SCOLNIK P A.Molecular cloning and expression in photosynthetic bacteria of a soybean cDNA coding for phytoene desaturase,an enzyme of the carotenoid biosynthesis pathway[J].Proceedings of the National Academy of Sciences,1991,88(15):6532-6536.
- [6]RUIZ-SOLA M A,RODRíGUEZ-CONCEPCIóN M.Carotenoid biosynthesis in Arabidopsis:A colorful pathway[J].The Arabidopsis Book,2012,10:e0158.
- [7]VALLABHANENI R,BRADBURY L M T,WURTZEL E T.The carotenoid dioxygenase gene family in maize,sorghum,and rice[J].Archives of Biochemistry and Biophysics,2010,504(1):1-111.
- [8]TSUCHIYA Y,VIDAURRE D,TOH S.A small-molecule screen identifies new functions for the plant hormone strigolactone[J].Nature Chemical Biology,2010,6(10):741-749.
- [9]RUBIO-MORAGA A,RAMBLA J L,FERNáNDEZ-DE-CAR-MEN A,TRAPERO-MOZOS A,AHRAZEM O,ORZáEZ D,GRANELL A,GóMEZ-GóMEZ L.New target carotenoids for CCD4 enzymes are revealed with the characterization of a novel stress-induced carotenoid cleavage dioxygenase gene from Crocus sativus[J].Plant Molecular Biology,2014,86(4/5):555-569.
- [10]PHADUNGSAWAT B,WATANABE K,MIZUNO S.Expression of CCD4 gene involved in carotenoid degradation in yellow-flowered Petunia×hybrida[J].Scientia Horticulturae,2020,261:108916.
- [11]BRANDI F,BAR E,MOURGUES F.Study of‘Redhaven’peach and its white-fleshed mutant suggests a key role of CCD4carotenoid dioxygenase in carotenoid and norisoprenoid volatile metabolism[J].BMC Plant Biology,2011,11(1):24
- [12]ADAMI M,DE FRANCESCHI P,BRANDI F.Identifying a carotenoid cleavage dioxygenase (ccd4) gene controlling yellow/white fruit flesh color of peach[J].Plant Molecular Biology Reporter,2013,31(5):1166-1175.
- [13]朱运钦,曾文芳,鲁振华,牛良,崔国朝,王志强.‘中油桃9号’及其黄肉芽变的类胡萝卜素代谢和基因表达分析[J].园艺学报,2015,42(4):623-632.ZHU Yunqin,ZENG Wenfang,LU Zhenhua,NIU Liang,CUIGuochao,WANG Zhiqiang.Carotenoid metabolism and gene expression analysis of‘CN9’nectarine and its yellow flesh mutant‘CN9Y’[J].Acta Horticulturae Sinica,2015,42(4):623-632.
- [14]LIVAK K J,SCHMITTGEN T D.Analysis of relative gene expression data using real-time quantitative PCR and the 2-ΔΔCTmethod[J].Methods,2001,25(4):402-408.
- [15]颜少宾.桃果实发育阶段类胡萝卜素的变化分析[D].南京:南京农业大学,2012.YAN Shaobin.Analysis of carotenoid of the fruit development in Prunus persica[D].Nanjing:Nanjing Agricultural University,2012.
- [16]CONNORS C H.Some notes on the inheritance of unit characters in the peach[J].Proceedings of the American Society for Horticultural Science,1919,16:24-36.
- [17]CAO S,LIANG M,SHI L.Accumulation of carotenoids and expression of carotenogenic genes in peach fruit[J].Food Chemistry,2017,214:137-146.
- [18]FALCHI R,VENDRAMIN E,ZANON L.Three distinct mutational mechanisms acting on a single gene underpin the origin of yellow flesh in peach[J].The Plant Journal,2013,76(2):175-187.
- [19]DE FRANCISCO AMORIM M,WILLING E M,SZABO E X,FRANCISCO-MANGILET A G,DROSTE-BOREL I,MACEKB,SCHNEEBERGER K,LAUBINGER S.The U1 snRNP subunit LUC7 modulates plant development and stress responses via regulation of alternative splicing[J].The Plant Cell,2018,30(11):2838-2854.
- [20]CáCERES J F,KORNBLIHTT A R.Alternative splicing:multiple control mechanisms and involvement in human disease[J].Trends in Genetics,2002,18(4):186-193.
- [21]GOLDSTROHM A C,GREENLEAF A L,GARCIA-BLANCOM A.Co-transcriptional splicing of pre-messenger RNAs:considerations for the mechanism of alternative splicing[J].Gene,2001,277(1/2):31-47.
- [22]HASTINGS M L,KRAINER A R.Pre-mRNA splicing in the new millennium[J].Current Opinion in Cell Biology,2001,13(3):302-309.
- [23]AYUB R A,BOSETTO L,GALV?O C W.Abscisic acid involvement on expression of related gene and phytochemicals during ripening in strawberry fruit Fragaria×ananassa cv.Camino Real[J].Scientia Horticulturae,2016,203:178-184.
- [24]裴雁曦,陈竹君,曹家树.茎瘤芥胞质雄性不育性与线粒体T基因选择性剪接有关[J].中国科学通报,2004,49(22):2312-2317.PEI Yanxi,CHEN Zhujun,CAO Jiashu.Cytoplasmic male sterility in stem mustard is related to alternative splicing of mitochondrial T gene[J].Chinese Science Bulletin,2004,49(22):2312-2317.
- [25]GRAVELEY B R.Alternative splicing:increasing diversity in the proteomic world[J].Trends in Genetics,2001,17(2):100-107.
- [26]SUN T,YUAN H,CAO H.Carotenoid metabolism in plants:the role of plastids[J].Molecular plant,2018,11(1):58-74.
- [27]陈栋,谢红江,李靖.套袋对桃果实品质形成和果皮色素变化规律的影响[J].西南农业学报,2011,24(6):118-122.CHEN Dong,XIE Hongjiang,LI Jing.Effects of bagging on fruit quality and variation of skin pigment of peach[J].Southwest China Journal of Agricultural Sciences,2011,24(6):118-122.
- [28]杨映根,张立军.桃果实采后生理特性初探[J].植物学通报,1995,12(4):47-49.YANG Yinggen,ZHANG Lijun.Study on the postharvest physiology properties of peach fruit[J].Chinese Bulletin of Botany,1995,12(4):47-49.
- [29]张学英.李果实着色与花色素苷合成机制研究[D].杭州:浙江大学,2008.ZHANG Xueying.Research on pigmentation and mechanism of anthocyanin synthesis in plum (Prunus spp.) fruits[D].Hangzhou:Zhejiang University,2008.
- [30]PRIYA R,SNEHA P,DASS J F P.Exploring the codon patterns between CCD and NCED genes among different plant species[J].Computers in Biology and Medicine,2019,114:103449.